Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RIPK2O43353 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.91■□□□□ 0.14
RIPK2O43353 RARRES2P8-201ENST00000566335 367 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 AP002472.1-201ENST00000577490 586 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RIPK2O43353 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RIPK2O43353 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.91■□□□□ 0.14
RIPK2O43353 AC027601.5-201ENST00000624065 2482 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 AC097359.2-201ENST00000604992 2389 ntBASIC15.91■□□□□ 0.14
RIPK2O43353 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RIPK2O43353 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.9■□□□□ 0.14
RIPK2O43353 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.9■□□□□ 0.14
RIPK2O43353 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RIPK2O43353 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.9■□□□□ 0.14
RIPK2O43353 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RIPK2O43353 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.9■□□□□ 0.14
RIPK2O43353 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.9■□□□□ 0.14
RIPK2O43353 AP000845.1-201ENST00000581677 2131 ntBASIC15.9■□□□□ 0.14
RIPK2O43353 AC011467.4-201ENST00000594891 528 ntBASIC15.9■□□□□ 0.14
RIPK2O43353 AL031008.1-201ENST00000619963 541 ntBASIC15.9■□□□□ 0.14
RIPK2O43353 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.9■□□□□ 0.14
RIPK2O43353 OR2I1P-210ENST00000642037 4691 ntBASIC15.9■□□□□ 0.14
RIPK2O43353 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.9■□□□□ 0.14
RIPK2O43353 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RIPK2O43353 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.9■□□□□ 0.14
RIPK2O43353 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RIPK2O43353 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.9■□□□□ 0.14
RIPK2O43353 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 HSPA7-201ENST00000445535 1927 ntBASIC15.9■□□□□ 0.14
RIPK2O43353 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RIPK2O43353 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RIPK2O43353 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.9■□□□□ 0.14
RIPK2O43353 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.89■□□□□ 0.13
RIPK2O43353 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.89■□□□□ 0.13
RIPK2O43353 AC079776.4-201ENST00000511039 504 ntBASIC15.89■□□□□ 0.13
RIPK2O43353 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.89■□□□□ 0.13
RIPK2O43353 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.89■□□□□ 0.13
RIPK2O43353 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 AC027307.2-201ENST00000591252 911 ntBASIC15.89■□□□□ 0.13
RIPK2O43353 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RIPK2O43353 AL161772.1-201ENST00000610494 4412 ntBASIC15.89■□□□□ 0.13
RIPK2O43353 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
RIPK2O43353 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms