Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PITPNM1O00562 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.23■□□□□ 0.35
PITPNM1O00562 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PITPNM1O00562 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 CETN4P-201ENST00000432407 469 ntBASIC17.23■□□□□ 0.35
PITPNM1O00562 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC17.23■□□□□ 0.35
PITPNM1O00562 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.23■□□□□ 0.35
PITPNM1O00562 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.23■□□□□ 0.35
PITPNM1O00562 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AC008592.3-201ENST00000514941 418 ntBASIC17.23■□□□□ 0.35
PITPNM1O00562 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC17.23■□□□□ 0.35
PITPNM1O00562 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.23■□□□□ 0.35
PITPNM1O00562 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.23■□□□□ 0.35
PITPNM1O00562 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC17.23■□□□□ 0.35
PITPNM1O00562 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC17.23■□□□□ 0.35
PITPNM1O00562 AC090772.4-201ENST00000623599 362 ntBASIC17.23■□□□□ 0.35
PITPNM1O00562 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PITPNM1O00562 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PITPNM1O00562 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 AC095050.2-201ENST00000510748 1458 ntBASIC17.23■□□□□ 0.35
PITPNM1O00562 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PITPNM1O00562 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PITPNM1O00562 SYT14P1-202ENST00000600441 1448 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 AL645608.8-201ENST00000606034 2086 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 AC006001.1-201ENST00000325130 474 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 AC004945.1-201ENST00000416738 983 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 HMGN1P6-201ENST00000438508 291 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.22■□□□□ 0.35
PITPNM1O00562 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC17.22■□□□□ 0.35
PITPNM1O00562 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC17.22■□□□□ 0.35
PITPNM1O00562 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC17.22■□□□□ 0.35
PITPNM1O00562 ASB8-215ENST00000540782 659 ntTSL 3 BASIC17.22■□□□□ 0.35
PITPNM1O00562 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.22■□□□□ 0.35
PITPNM1O00562 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.22■□□□□ 0.35
PITPNM1O00562 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 AC135507.1-201ENST00000607214 561 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 AC107905.1-201ENST00000616204 426 ntBASIC17.22■□□□□ 0.35
PITPNM1O00562 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PITPNM1O00562 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PITPNM1O00562 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PITPNM1O00562 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms