Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL592309.1-201ENST00000443127 649 ntBASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 GPALPP1-207ENST00000611650 899 ntBASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AC006538.3-201ENST00000612495 578 ntBASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AC139530.3-201ENST00000620344 690 ntBASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 AC055717.3-201ENST00000622967 595 ntBASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LIN7CQ9NUP9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.08□□□□□ -0.31
LIN7CQ9NUP9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.08□□□□□ -0.31
LIN7CQ9NUP9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LIN7CQ9NUP9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LIN7CQ9NUP9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LIN7CQ9NUP9 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AL136379.1-201ENST00000623471 2642 ntBASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 SPCS2P4-201ENST00000436160 681 ntBASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AC027307.2-201ENST00000591252 911 ntBASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AC073389.1-201ENST00000595595 795 ntBASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AC126365.1-201ENST00000578585 1514 ntBASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
LIN7CQ9NUP9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIN7CQ9NUP9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms