Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 AC004233.3-201ENST00000607794 1269 ntBASIC16.66■□□□□ 0.26
CISHQ9NSE2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 SLC7A15P-201ENST00000424028 1363 ntBASIC16.65■□□□□ 0.26
CISHQ9NSE2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 RPL5P21-201ENST00000404620 815 ntBASIC16.65■□□□□ 0.26
CISHQ9NSE2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 AC007541.1-201ENST00000570282 1469 ntBASIC16.65■□□□□ 0.26
CISHQ9NSE2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.65■□□□□ 0.26
CISHQ9NSE2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CISHQ9NSE2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CISHQ9NSE2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CISHQ9NSE2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.64■□□□□ 0.26
CISHQ9NSE2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.64■□□□□ 0.26
CISHQ9NSE2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CISHQ9NSE2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 DFFBP1-201ENST00000433250 979 ntBASIC16.64■□□□□ 0.25
CISHQ9NSE2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 AC055876.2-201ENST00000531834 546 ntBASIC16.64■□□□□ 0.25
CISHQ9NSE2 AC036164.1-201ENST00000570544 333 ntBASIC16.64■□□□□ 0.25
CISHQ9NSE2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 AL132655.2-201ENST00000596276 594 ntBASIC16.64■□□□□ 0.25
CISHQ9NSE2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 FER1L4-210ENST00000615531 5998 ntBASIC16.64■□□□□ 0.25
CISHQ9NSE2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.64■□□□□ 0.25
CISHQ9NSE2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms