Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 FTH1P22-201ENST00000456305 520 ntBASIC25.11■■□□□ 1.61
IFT140Q96RY7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 LINC00431-202ENST00000636375 159 ntBASIC25.11■■□□□ 1.61
IFT140Q96RY7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC25.11■■□□□ 1.61
IFT140Q96RY7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
IFT140Q96RY7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
IFT140Q96RY7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
IFT140Q96RY7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
IFT140Q96RY7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
IFT140Q96RY7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
IFT140Q96RY7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
IFT140Q96RY7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 NEFHP1-201ENST00000412845 2629 ntBASIC25.09■■□□□ 1.61
IFT140Q96RY7 MBP-201ENST00000354542 575 ntTSL 2 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 AL157407.1-201ENST00000435784 904 ntBASIC25.09■■□□□ 1.61
IFT140Q96RY7 DDX39AP1-201ENST00000445147 1181 ntBASIC25.09■■□□□ 1.61
IFT140Q96RY7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 AC024293.1-201ENST00000467930 498 ntBASIC25.09■■□□□ 1.61
IFT140Q96RY7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 SIGLEC18P-201ENST00000602271 909 ntBASIC25.09■■□□□ 1.61
IFT140Q96RY7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFT140Q96RY7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
IFT140Q96RY7 AC015909.3-201ENST00000572855 1794 ntBASIC25.08■■□□□ 1.61
IFT140Q96RY7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
IFT140Q96RY7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC25.08■■□□□ 1.61
IFT140Q96RY7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
IFT140Q96RY7 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
IFT140Q96RY7 AL138725.1-201ENST00000407347 1314 ntBASIC25.08■■□□□ 1.61
IFT140Q96RY7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
IFT140Q96RY7 BAK1P1-201ENST00000317045 636 ntBASIC25.08■■□□□ 1.6
IFT140Q96RY7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC25.08■■□□□ 1.6
IFT140Q96RY7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
IFT140Q96RY7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC25.08■■□□□ 1.6
IFT140Q96RY7 AL645933.1-201ENST00000440087 609 ntBASIC25.08■■□□□ 1.6
IFT140Q96RY7 AGPAT5P1-201ENST00000455855 1019 ntBASIC25.08■■□□□ 1.6
IFT140Q96RY7 LINC00634-202ENST00000505157 222 ntBASIC25.08■■□□□ 1.6
IFT140Q96RY7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
IFT140Q96RY7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
IFT140Q96RY7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC25.08■■□□□ 1.6
IFT140Q96RY7 MIR3188-201ENST00000583494 85 ntBASIC25.08■■□□□ 1.6
IFT140Q96RY7 AC073592.2-201ENST00000623062 780 ntBASIC25.08■■□□□ 1.6
IFT140Q96RY7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC25.08■■□□□ 1.6
IFT140Q96RY7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
IFT140Q96RY7 AC124067.4-201ENST00000519691 2379 ntBASIC25.07■■□□□ 1.6
IFT140Q96RY7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
IFT140Q96RY7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
IFT140Q96RY7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC25.07■■□□□ 1.6
IFT140Q96RY7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
IFT140Q96RY7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC25.07■■□□□ 1.6
IFT140Q96RY7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC25.07■■□□□ 1.6
IFT140Q96RY7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
IFT140Q96RY7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms