Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.29□□□□□ -0.44
RAX2Q96IS3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RAX2Q96IS3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAX2Q96IS3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAX2Q96IS3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAX2Q96IS3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 DGCR5-201ENST00000399539 862 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 AZGP1P1-201ENST00000411909 902 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 COX5BP8-201ENST00000416911 349 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 EEF1DP4-201ENST00000446006 880 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CR383656.12-201ENST00000549567 513 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC023310.3-201ENST00000557027 670 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC100756.1-201ENST00000562736 682 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC138749.3-201ENST00000567691 622 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC008494.3-201ENST00000606615 944 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC116165.1-201ENST00000611806 668 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 AC007431.3-201ENST00000623221 587 ntBASIC12.28□□□□□ -0.44
RAX2Q96IS3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
RAX2Q96IS3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAX2Q96IS3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.27□□□□□ -0.44
RAX2Q96IS3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAX2Q96IS3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAX2Q96IS3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.27□□□□□ -0.44
RAX2Q96IS3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAX2Q96IS3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAX2Q96IS3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAX2Q96IS3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.44
RAX2Q96IS3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAX2Q96IS3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RAX2Q96IS3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAX2Q96IS3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RAX2Q96IS3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAX2Q96IS3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAX2Q96IS3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAX2Q96IS3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.27□□□□□ -0.45
RAX2Q96IS3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.27□□□□□ -0.45
RAX2Q96IS3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAX2Q96IS3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAX2Q96IS3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAX2Q96IS3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.27□□□□□ -0.45
RAX2Q96IS3 HAUS4P1-201ENST00000406739 1145 ntBASIC12.27□□□□□ -0.45
RAX2Q96IS3 MEP1AP4-201ENST00000423244 1087 ntBASIC12.27□□□□□ -0.45
RAX2Q96IS3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.27□□□□□ -0.45
RAX2Q96IS3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms