Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 AC004987.2-201ENST00000395959 1148 ntBASIC18.62■□□□□ 0.57
DDX11Q96FC9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 AL512361.1-201ENST00000554200 418 ntBASIC18.62■□□□□ 0.57
DDX11Q96FC9 AC104794.3-201ENST00000566840 1248 ntBASIC18.62■□□□□ 0.57
DDX11Q96FC9 AC140912.1-201ENST00000577171 1054 ntBASIC18.62■□□□□ 0.57
DDX11Q96FC9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 MIR4313-201ENST00000580760 101 ntBASIC18.62■□□□□ 0.57
DDX11Q96FC9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
DDX11Q96FC9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX11Q96FC9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 AL139010.1-201ENST00000454878 894 ntBASIC18.61■□□□□ 0.57
DDX11Q96FC9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 AC044860.1-202ENST00000559481 777 ntBASIC18.61■□□□□ 0.57
DDX11Q96FC9 AC010336.2-201ENST00000564226 506 ntBASIC18.61■□□□□ 0.57
DDX11Q96FC9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX11Q96FC9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX11Q96FC9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 OR8S1-201ENST00000310194 1080 ntBASIC18.6■□□□□ 0.57
DDX11Q96FC9 SPDYE19P-201ENST00000338590 713 ntBASIC18.6■□□□□ 0.57
DDX11Q96FC9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms