Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC104596.2-201ENST00000512793 793 ntBASIC13.89□□□□□ -0.19
APH1AQ96BI3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 AC140912.1-201ENST00000577171 1054 ntBASIC13.89□□□□□ -0.19
APH1AQ96BI3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 AC099568.2-201ENST00000609194 695 ntBASIC13.89□□□□□ -0.19
APH1AQ96BI3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APH1AQ96BI3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APH1AQ96BI3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APH1AQ96BI3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APH1AQ96BI3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APH1AQ96BI3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APH1AQ96BI3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APH1AQ96BI3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APH1AQ96BI3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 AL133267.1-201ENST00000398220 340 ntBASIC13.88□□□□□ -0.19
APH1AQ96BI3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.88□□□□□ -0.19
APH1AQ96BI3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 AC008741.2-201ENST00000612792 3115 ntBASIC13.88□□□□□ -0.19
APH1AQ96BI3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 CICP13-201ENST00000422015 2789 ntBASIC13.88□□□□□ -0.19
APH1AQ96BI3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APH1AQ96BI3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
APH1AQ96BI3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.87□□□□□ -0.19
APH1AQ96BI3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 LINC02084-201ENST00000606069 1096 ntBASIC13.87□□□□□ -0.19
APH1AQ96BI3 AC093726.1-201ENST00000608064 963 ntBASIC13.87□□□□□ -0.19
APH1AQ96BI3 AL662799.1-202ENST00000614205 422 ntBASIC13.87□□□□□ -0.19
APH1AQ96BI3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.87□□□□□ -0.19
APH1AQ96BI3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APH1AQ96BI3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms