Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC33Q8N5R6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 REXO1L1P-202ENST00000608646 1974 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC023824.1-201ENST00000562945 2975 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 GPR53P-205ENST00000457298 1084 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC093004.1-201ENST00000508850 424 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC243562.2-201ENST00000561247 970 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AC126177.1-201ENST00000547829 2218 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 AL391825.1-201ENST00000457671 1364 ntBASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC33Q8N5R6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AC136621.1-201ENST00000624017 2304 ntBASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AC114501.2-201ENST00000439631 535 ntBASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AC004461.2-201ENST00000629517 803 ntBASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AL109936.8-201ENST00000641772 604 ntBASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC33Q8N5R6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC33Q8N5R6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC33Q8N5R6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 NORAD-201ENST00000565493 5339 ntBASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AL512384.1-201ENST00000406683 331 ntBASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms