Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 RPL5P21-201ENST00000404620 815 ntBASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AC092171.5-201ENST00000608012 942 ntBASIC21.12■□□□□ 0.97
XRN1Q8IZH2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AL157414.3-201ENST00000624276 1954 ntBASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 FAM58BP-201ENST00000439056 645 ntBASIC21.12■□□□□ 0.97
XRN1Q8IZH2 PUDPP3-201ENST00000445368 636 ntBASIC21.12■□□□□ 0.97
XRN1Q8IZH2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 PGAM1P5-201ENST00000548011 764 ntBASIC21.12■□□□□ 0.97
XRN1Q8IZH2 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 AL138725.1-201ENST00000407347 1314 ntBASIC21.12■□□□□ 0.97
XRN1Q8IZH2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRN1Q8IZH2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 AL596087.1-201ENST00000400979 1969 ntBASIC21.11■□□□□ 0.97
XRN1Q8IZH2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 AC099398.1-201ENST00000567919 2776 ntBASIC21.11■□□□□ 0.97
XRN1Q8IZH2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XRN1Q8IZH2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 AC012313.1-201ENST00000593393 3059 ntBASIC21.1■□□□□ 0.97
XRN1Q8IZH2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
XRN1Q8IZH2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms