Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
RAB43Q86YS6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.04■□□□□ -0
RAB43Q86YS6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.04■□□□□ -0
RAB43Q86YS6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.04■□□□□ -0
RAB43Q86YS6 RN7SL752P-201ENST00000463779 287 ntBASIC15.04■□□□□ -0
RAB43Q86YS6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.04■□□□□ -0
RAB43Q86YS6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
RAB43Q86YS6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAB43Q86YS6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAB43Q86YS6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 AC074044.1-201ENST00000609673 707 ntBASIC15.04■□□□□ -0
RAB43Q86YS6 AC004461.2-201ENST00000629517 803 ntBASIC15.04■□□□□ -0
RAB43Q86YS6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RAB43Q86YS6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.04■□□□□ -0
RAB43Q86YS6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB43Q86YS6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB43Q86YS6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 TNRC18P2-201ENST00000417666 2714 ntBASIC15.03■□□□□ -0
RAB43Q86YS6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.03■□□□□ -0
RAB43Q86YS6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB43Q86YS6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 SPDYE18-201ENST00000510091 1050 ntBASIC15.03■□□□□ -0
RAB43Q86YS6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 TIMM17BP1-201ENST00000545713 516 ntBASIC15.03■□□□□ -0
RAB43Q86YS6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.03■□□□□ -0
RAB43Q86YS6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.03■□□□□ -0
RAB43Q86YS6 AC008494.3-201ENST00000606615 944 ntBASIC15.03■□□□□ -0
RAB43Q86YS6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.03■□□□□ -0
RAB43Q86YS6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.03■□□□□ -0
RAB43Q86YS6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RAB43Q86YS6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.03■□□□□ -0
RAB43Q86YS6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB43Q86YS6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.02■□□□□ -0
RAB43Q86YS6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms