Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 AC069224.1-201ENST00000566372 1715 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 AL136309.1-201ENST00000403917 691 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 RPS2P36-201ENST00000456516 831 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 AL645939.5-201ENST00000606834 243 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 AC100757.4-201ENST00000626934 759 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 AC128714.1-201ENST00000637035 887 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 AL645728.2-202ENST00000641679 227 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 KRT8P29-201ENST00000420409 1371 ntBASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.6■□□□□ 0.25
CNKSR3Q6P9H4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AL596087.1-201ENST00000400979 1969 ntBASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC091046.1-201ENST00000331871 207 ntBASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC011742.3-201ENST00000439053 820 ntBASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC021723.1-201ENST00000486306 515 ntBASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 FGFR3P5-201ENST00000564496 886 ntBASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 SAMD11P1-201ENST00000571429 661 ntBASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNKSR3Q6P9H4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNKSR3Q6P9H4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms