Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC022137.2-201ENST00000503482 481 ntBASIC16.54■□□□□ 0.24
VARS2Q5ST30 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 AC027348.2-201ENST00000624375 642 ntBASIC16.54■□□□□ 0.24
VARS2Q5ST30 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
VARS2Q5ST30 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VARS2Q5ST30 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 AC010491.1-201ENST00000563101 2797 ntBASIC16.53■□□□□ 0.24
VARS2Q5ST30 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 LINC02199-201ENST00000506655 2702 ntBASIC16.53■□□□□ 0.24
VARS2Q5ST30 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 RPL7P3-201ENST00000441388 714 ntBASIC16.53■□□□□ 0.24
VARS2Q5ST30 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 GPR182-203ENST00000622922 591 ntBASIC16.53■□□□□ 0.24
VARS2Q5ST30 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 PCDHB19P-201ENST00000570871 2371 ntBASIC16.53■□□□□ 0.24
VARS2Q5ST30 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARS2Q5ST30 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 AL138799.1-201ENST00000448213 1675 ntBASIC16.53■□□□□ 0.24
VARS2Q5ST30 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VARS2Q5ST30 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 KRT8P44-201ENST00000441609 1350 ntBASIC16.52■□□□□ 0.24
VARS2Q5ST30 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 AC099336.1-201ENST00000417053 1171 ntBASIC16.52■□□□□ 0.24
VARS2Q5ST30 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC16.52■□□□□ 0.24
VARS2Q5ST30 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms