Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 MYCLP2-201ENST00000449268 967 ntBASIC20.24■□□□□ 0.83
CCDC27Q2M243 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 AC104596.2-201ENST00000512793 793 ntBASIC20.24■□□□□ 0.83
CCDC27Q2M243 AC120045.2-201ENST00000567334 178 ntBASIC20.24■□□□□ 0.83
CCDC27Q2M243 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 MIR3197-201ENST00000582241 73 ntBASIC20.24■□□□□ 0.83
CCDC27Q2M243 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 AC007431.3-201ENST00000623221 587 ntBASIC20.24■□□□□ 0.83
CCDC27Q2M243 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 SAMD11P1-201ENST00000571429 661 ntBASIC20.23■□□□□ 0.83
CCDC27Q2M243 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 CTBP2P3-201ENST00000585629 1255 ntBASIC20.23■□□□□ 0.83
CCDC27Q2M243 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC27Q2M243 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.23■□□□□ 0.83
CCDC27Q2M243 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC27Q2M243 AL138799.1-201ENST00000448213 1675 ntBASIC20.22■□□□□ 0.83
CCDC27Q2M243 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 WASH4P-201ENST00000564273 1246 ntBASIC20.22■□□□□ 0.83
CCDC27Q2M243 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC27Q2M243 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC27Q2M243 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms