Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 AL390961.4-201ENST00000623958 2535 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
HSPG2P98160 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 RN7SKP109-201ENST00000410592 316 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 AL157407.1-201ENST00000435784 904 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 AP003398.1-201ENST00000531124 318 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 AC018846.1-201ENST00000568231 183 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC9.38□□□□□ -0.91
HSPG2P98160 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
HSPG2P98160 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
HSPG2P98160 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
HSPG2P98160 RNF165-205ENST00000588679 2904 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC9.38□□□□□ -0.91
HSPG2P98160 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC9.38□□□□□ -0.91
HSPG2P98160 AL354861.1-201ENST00000445213 355 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 CHCHD2P2-201ENST00000503744 321 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HSPG2P98160 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC9.38□□□□□ -0.91
HSPG2P98160 RN7SL470P-201ENST00000583069 259 ntBASIC9.38□□□□□ -0.91
HSPG2P98160 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
HSPG2P98160 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 NCR3-202ENST00000376071 541 ntTSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 AC004837.1-201ENST00000446267 564 ntBASIC9.37□□□□□ -0.91
HSPG2P98160 GOLGA2P7-209ENST00000560408 745 ntBASIC9.37□□□□□ -0.91
HSPG2P98160 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 AC055811.4-201ENST00000624039 1754 ntBASIC9.37□□□□□ -0.91
HSPG2P98160 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
HSPG2P98160 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC9.37□□□□□ -0.91
HSPG2P98160 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC9.37□□□□□ -0.91
HSPG2P98160 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC9.37□□□□□ -0.91
HSPG2P98160 AC021016.3-201ENST00000608367 477 ntBASIC9.37□□□□□ -0.91
HSPG2P98160 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
HSPG2P98160 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 AREG-202ENST00000502307 956 ntTSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 TREHP1-201ENST00000531328 465 ntBASIC9.37□□□□□ -0.91
HSPG2P98160 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC9.37□□□□□ -0.91
HSPG2P98160 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC9.37□□□□□ -0.91
HSPG2P98160 DBP-202ENST00000593500 712 ntTSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC9.37□□□□□ -0.91
HSPG2P98160 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC9.37□□□□□ -0.91
HSPG2P98160 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
HSPG2P98160 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HSPG2P98160 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HSPG2P98160 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC9.36□□□□□ -0.91
HSPG2P98160 AC244197.1-201ENST00000456494 951 ntBASIC9.36□□□□□ -0.91
HSPG2P98160 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC9.36□□□□□ -0.91
HSPG2P98160 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC9.36□□□□□ -0.91
HSPG2P98160 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC9.36□□□□□ -0.91
HSPG2P98160 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC9.36□□□□□ -0.91
HSPG2P98160 AC005962.1-201ENST00000584100 773 ntBASIC9.36□□□□□ -0.91
HSPG2P98160 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms