Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NKX6-1P78426 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 AC079776.1-201ENST00000401540 1152 ntBASIC13.89□□□□□ -0.19
NKX6-1P78426 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX6-1P78426 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX6-1P78426 RN7SL618P-201ENST00000477850 296 ntBASIC13.89□□□□□ -0.19
NKX6-1P78426 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.89□□□□□ -0.19
NKX6-1P78426 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX6-1P78426 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX6-1P78426 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX6-1P78426 CHCHD2P3-201ENST00000603038 451 ntBASIC13.89□□□□□ -0.19
NKX6-1P78426 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 AC007431.3-201ENST00000623221 587 ntBASIC13.89□□□□□ -0.19
NKX6-1P78426 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 TCAF2P1-201ENST00000291129 2421 ntBASIC13.89□□□□□ -0.19
NKX6-1P78426 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-1P78426 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NKX6-1P78426 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX6-1P78426 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 AC006449.6-201ENST00000612330 2296 ntBASIC13.88□□□□□ -0.19
NKX6-1P78426 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 KRT8P12-202ENST00000472924 1397 ntBASIC13.88□□□□□ -0.19
NKX6-1P78426 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-1P78426 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
NKX6-1P78426 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX6-1P78426 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NKX6-1P78426 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-1P78426 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.88□□□□□ -0.19
NKX6-1P78426 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX6-1P78426 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NKX6-1P78426 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-1P78426 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-1P78426 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 AL136982.4-201ENST00000437689 1740 ntBASIC13.87□□□□□ -0.19
NKX6-1P78426 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms