Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DUX4L27-201ENST00000554796 1261 ntBASIC13.63□□□□□ -0.23
UBA52P62987 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 AL390955.2-201ENST00000603032 514 ntBASIC13.63□□□□□ -0.23
UBA52P62987 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 AC087386.2-201ENST00000623212 4637 ntBASIC13.63□□□□□ -0.23
UBA52P62987 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.62□□□□□ -0.23
UBA52P62987 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
UBA52P62987 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 KRT18P32-201ENST00000424695 1287 ntBASIC13.62□□□□□ -0.23
UBA52P62987 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 INGX-202ENST00000489074 768 ntBASIC13.62□□□□□ -0.23
UBA52P62987 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.62□□□□□ -0.23
UBA52P62987 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 AC190387.1-201ENST00000551683 408 ntBASIC13.62□□□□□ -0.23
UBA52P62987 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 AL139011.1-202ENST00000642063 584 ntBASIC13.62□□□□□ -0.23
UBA52P62987 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.62□□□□□ -0.23
UBA52P62987 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
UBA52P62987 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBA52P62987 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.61□□□□□ -0.23
UBA52P62987 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.61□□□□□ -0.23
UBA52P62987 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.61□□□□□ -0.23
UBA52P62987 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.61□□□□□ -0.23
UBA52P62987 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
UBA52P62987 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.61□□□□□ -0.23
UBA52P62987 TFAMP1-201ENST00000412727 736 ntBASIC13.61□□□□□ -0.23
UBA52P62987 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.61□□□□□ -0.23
UBA52P62987 BASP1P1-201ENST00000430708 665 ntBASIC13.61□□□□□ -0.23
UBA52P62987 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.61□□□□□ -0.23
UBA52P62987 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.61□□□□□ -0.23
UBA52P62987 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 AC079140.1-201ENST00000508039 487 ntBASIC13.61□□□□□ -0.23
UBA52P62987 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms