Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
GFRA1P56159 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.96□□□□□ -0.17
GFRA1P56159 USP32P1-208ENST00000506594 1164 ntBASIC13.96□□□□□ -0.17
GFRA1P56159 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.96□□□□□ -0.17
GFRA1P56159 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.96□□□□□ -0.17
GFRA1P56159 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.96□□□□□ -0.17
GFRA1P56159 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.96□□□□□ -0.17
GFRA1P56159 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 AL513477.1-201ENST00000602865 2407 ntBASIC13.96□□□□□ -0.17
GFRA1P56159 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.96□□□□□ -0.17
GFRA1P56159 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
GFRA1P56159 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GFRA1P56159 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GFRA1P56159 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.96□□□□□ -0.18
GFRA1P56159 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.96□□□□□ -0.18
GFRA1P56159 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
GFRA1P56159 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GFRA1P56159 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GFRA1P56159 AL138799.1-201ENST00000448213 1675 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
GFRA1P56159 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
GFRA1P56159 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
GFRA1P56159 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
GFRA1P56159 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
GFRA1P56159 GK-202ENST00000378941 458 ntTSL 3 BASIC13.95□□□□□ -0.18
GFRA1P56159 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 RPL5P21-201ENST00000404620 815 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.95□□□□□ -0.18
GFRA1P56159 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
GFRA1P56159 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.95□□□□□ -0.18
GFRA1P56159 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.95□□□□□ -0.18
GFRA1P56159 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 AP001063.1-201ENST00000568332 529 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 AC009486.1-201ENST00000569860 813 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.95□□□□□ -0.18
GFRA1P56159 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GFRA1P56159 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.95□□□□□ -0.18
GFRA1P56159 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.95□□□□□ -0.18
GFRA1P56159 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.95□□□□□ -0.18
GFRA1P56159 AL645728.2-202ENST00000641679 227 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.95□□□□□ -0.18
GFRA1P56159 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
GFRA1P56159 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms