Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC096734.2-201ENST00000562054 433 ntBASIC14.96□□□□□ -0.01
NR1H2P55055 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NR1H2P55055 C20orf181-201ENST00000623918 480 ntBASIC14.96□□□□□ -0.01
NR1H2P55055 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H2P55055 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H2P55055 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.96□□□□□ -0.02
NR1H2P55055 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H2P55055 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NR1H2P55055 ST20-AS1-201ENST00000560255 4223 ntBASIC14.96□□□□□ -0.02
NR1H2P55055 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H2P55055 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H2P55055 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
NR1H2P55055 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 CICP20-201ENST00000443330 2801 ntBASIC14.95□□□□□ -0.02
NR1H2P55055 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 MKNK2P1-201ENST00000437526 628 ntBASIC14.95□□□□□ -0.02
NR1H2P55055 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
NR1H2P55055 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NR1H2P55055 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 LINC02084-201ENST00000606069 1096 ntBASIC14.95□□□□□ -0.02
NR1H2P55055 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.95□□□□□ -0.02
NR1H2P55055 AL596442.2-201ENST00000610240 980 ntBASIC14.95□□□□□ -0.02
NR1H2P55055 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 AC007064.4-201ENST00000637740 555 ntBASIC14.95□□□□□ -0.02
NR1H2P55055 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H2P55055 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 AC140479.7-201ENST00000636301 2332 ntBASIC14.95□□□□□ -0.02
NR1H2P55055 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NR1H2P55055 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H2P55055 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H2P55055 PI4KAP1-204ENST00000612579 1703 ntBASIC14.95□□□□□ -0.02
NR1H2P55055 PTENP1-202ENST00000532280 3996 ntBASIC14.94□□□□□ -0.02
NR1H2P55055 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H2P55055 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H2P55055 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H2P55055 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.94□□□□□ -0.02
NR1H2P55055 DNAJB3-202ENST00000449667 1266 ntBASIC14.94□□□□□ -0.02
NR1H2P55055 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.94□□□□□ -0.02
NR1H2P55055 YBX1P5-201ENST00000509441 847 ntBASIC14.94□□□□□ -0.02
NR1H2P55055 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H2P55055 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H2P55055 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.94□□□□□ -0.02
NR1H2P55055 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NR1H2P55055 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.94□□□□□ -0.02
NR1H2P55055 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms