Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CYP2T1P-202ENST00000641596 2535 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPHB3P54753 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
EPHB3P54753 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.26■□□□□ 0.19
EPHB3P54753 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
EPHB3P54753 TUBB1P2-201ENST00000422712 1306 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 KRT8P35-201ENST00000483942 1338 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 TUBB1P1-201ENST00000503144 1300 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHB3P54753 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
EPHB3P54753 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHB3P54753 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 BRWD1P1-201ENST00000401091 371 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHB3P54753 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 ACTBP11-201ENST00000436287 1126 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHB3P54753 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHB3P54753 AC025279.2-201ENST00000569730 653 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.26■□□□□ 0.19
EPHB3P54753 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
EPHB3P54753 GNRHR2-203ENST00000581100 1187 ntBASIC16.26■□□□□ 0.19
EPHB3P54753 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHB3P54753 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHB3P54753 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPHB3P54753 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHB3P54753 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
EPHB3P54753 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHB3P54753 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
EPHB3P54753 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 NUS1P3-201ENST00000423502 862 ntBASIC16.25■□□□□ 0.19
EPHB3P54753 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHB3P54753 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
EPHB3P54753 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.25■□□□□ 0.19
EPHB3P54753 AC022494.1-201ENST00000466044 728 ntBASIC16.25■□□□□ 0.19
EPHB3P54753 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.25■□□□□ 0.19
EPHB3P54753 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
EPHB3P54753 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.25■□□□□ 0.19
EPHB3P54753 AC010328.2-201ENST00000597698 1111 ntBASIC16.25■□□□□ 0.19
EPHB3P54753 AC145423.3-201ENST00000615987 467 ntBASIC16.25■□□□□ 0.19
EPHB3P54753 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHB3P54753 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHB3P54753 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHB3P54753 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
EPHB3P54753 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHB3P54753 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
EPHB3P54753 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHB3P54753 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.24■□□□□ 0.19
EPHB3P54753 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHB3P54753 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.24■□□□□ 0.19
EPHB3P54753 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
EPHB3P54753 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHB3P54753 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHB3P54753 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHB3P54753 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.24■□□□□ 0.19
EPHB3P54753 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms