Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN3P51790 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CLCN3P51790 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN3P51790 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCN3P51790 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCN3P51790 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN3P51790 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLCN3P51790 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLCN3P51790 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CLCN3P51790 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN3P51790 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN3P51790 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CLCN3P51790 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN3P51790 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN3P51790 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 ACKR1-201ENST00000368121 1240 ntBASIC17.1■□□□□ 0.33
CLCN3P51790 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCN3P51790 AC007551.1-201ENST00000457394 519 ntBASIC17.1■□□□□ 0.33
CLCN3P51790 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.1■□□□□ 0.33
CLCN3P51790 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 GNRHR2-203ENST00000581100 1187 ntBASIC17.1■□□□□ 0.33
CLCN3P51790 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN3P51790 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN3P51790 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN3P51790 AL033527.4-201ENST00000641026 673 ntBASIC17.1■□□□□ 0.33
CLCN3P51790 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLCN3P51790 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN3P51790 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN3P51790 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN3P51790 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 AC099336.1-201ENST00000417053 1171 ntBASIC17.09■□□□□ 0.33
CLCN3P51790 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.09■□□□□ 0.33
CLCN3P51790 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCN3P51790 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN3P51790 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms