Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.39□□□□□ -0.11
RFC3P40938 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 AC036164.1-201ENST00000570544 333 ntBASIC14.39□□□□□ -0.11
RFC3P40938 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.39□□□□□ -0.11
RFC3P40938 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RFC3P40938 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RFC3P40938 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.39□□□□□ -0.11
RFC3P40938 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RFC3P40938 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.38□□□□□ -0.11
RFC3P40938 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.38□□□□□ -0.11
RFC3P40938 ATP5G2P4-201ENST00000442175 420 ntBASIC14.38□□□□□ -0.11
RFC3P40938 GPR53P-205ENST00000457298 1084 ntBASIC14.38□□□□□ -0.11
RFC3P40938 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 RN7SL399P-201ENST00000471648 279 ntBASIC14.38□□□□□ -0.11
RFC3P40938 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.38□□□□□ -0.11
RFC3P40938 IGHV3-71-201ENST00000523324 359 ntBASIC14.38□□□□□ -0.11
RFC3P40938 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.38□□□□□ -0.11
RFC3P40938 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
RFC3P40938 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 AL607033.1-201ENST00000623900 1599 ntBASIC14.38□□□□□ -0.11
RFC3P40938 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
RFC3P40938 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFC3P40938 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RFC3P40938 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
RFC3P40938 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.37□□□□□ -0.11
RFC3P40938 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.37□□□□□ -0.11
RFC3P40938 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.37□□□□□ -0.11
RFC3P40938 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.37□□□□□ -0.11
RFC3P40938 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 ARSEP1-201ENST00000420443 635 ntBASIC14.37□□□□□ -0.11
RFC3P40938 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 AC007274.1-201ENST00000439805 662 ntBASIC14.37□□□□□ -0.11
RFC3P40938 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.37□□□□□ -0.11
RFC3P40938 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFC3P40938 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.37□□□□□ -0.11
RFC3P40938 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.37□□□□□ -0.11
RFC3P40938 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.37□□□□□ -0.11
RFC3P40938 HNRNPUP1-201ENST00000554987 333 ntBASIC14.37□□□□□ -0.11
RFC3P40938 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.37□□□□□ -0.11
RFC3P40938 AL033527.5-201ENST00000641382 801 ntBASIC14.37□□□□□ -0.11
RFC3P40938 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFC3P40938 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms