Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 AC004987.2-201ENST00000395959 1148 ntBASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 NME2P1-201ENST00000426182 414 ntBASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 KRT17P7-201ENST00000451704 1104 ntBASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 AC055876.2-201ENST00000531834 546 ntBASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 TPRX2P-201ENST00000535362 881 ntBASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 AC074044.1-201ENST00000609673 707 ntBASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 COX5BP8-201ENST00000416911 349 ntBASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 MEP1AP4-201ENST00000423244 1087 ntBASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AC244107.1-201ENST00000442033 332 ntBASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 TIMM17BP1-201ENST00000545713 516 ntBASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 AL691432.1-201ENST00000596308 1422 ntBASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMIGD3P0DMS9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMIGD3P0DMS9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMIGD3P0DMS9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.21□□□□□ -0.13
TMIGD3P0DMS9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMIGD3P0DMS9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.21□□□□□ -0.13
TMIGD3P0DMS9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMIGD3P0DMS9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMIGD3P0DMS9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms