Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 RRP7BP-205ENST00000566851 833 ntBASIC13.99□□□□□ -0.17
CNOT4O95628 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.99□□□□□ -0.17
CNOT4O95628 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.99□□□□□ -0.17
CNOT4O95628 AC004461.2-201ENST00000629517 803 ntBASIC13.99□□□□□ -0.17
CNOT4O95628 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CNOT4O95628 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 AC132872.4-202ENST00000622924 2756 ntBASIC13.98□□□□□ -0.17
CNOT4O95628 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.98□□□□□ -0.17
CNOT4O95628 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CNOT4O95628 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CNOT4O95628 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.98□□□□□ -0.17
CNOT4O95628 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.98□□□□□ -0.17
CNOT4O95628 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CNOT4O95628 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.98□□□□□ -0.17
CNOT4O95628 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CNOT4O95628 AC099568.2-201ENST00000609194 695 ntBASIC13.98□□□□□ -0.17
CNOT4O95628 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CNOT4O95628 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.98□□□□□ -0.17
CNOT4O95628 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNOT4O95628 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT4O95628 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms