Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.71■□□□□ 0.27
O00370 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
O00370 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
O00370 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.71■□□□□ 0.27
O00370 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
O00370 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 FAM8A3P-201ENST00000427218 844 ntBASIC16.71■□□□□ 0.27
O00370 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.71■□□□□ 0.27
O00370 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 BCRP1-201ENST00000444246 691 ntBASIC16.71■□□□□ 0.27
O00370 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.71■□□□□ 0.27
O00370 AC135586.1-201ENST00000539323 574 ntBASIC16.71■□□□□ 0.27
O00370 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.71■□□□□ 0.27
O00370 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.71■□□□□ 0.27
O00370 SPCS2P1-201ENST00000561636 679 ntBASIC16.71■□□□□ 0.27
O00370 AC092337.1-201ENST00000568699 1129 ntBASIC16.71■□□□□ 0.27
O00370 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.71■□□□□ 0.27
O00370 AJ011932.1-201ENST00000621707 465 ntBASIC16.71■□□□□ 0.27
O00370 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
O00370 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
O00370 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.71■□□□□ 0.27
O00370 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
O00370 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
O00370 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.71■□□□□ 0.26
O00370 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
O00370 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
O00370 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
O00370 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
O00370 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 AC015922.1-201ENST00000421102 1152 ntBASIC16.7■□□□□ 0.26
O00370 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
O00370 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.7■□□□□ 0.26
O00370 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.7■□□□□ 0.26
O00370 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.7■□□□□ 0.26
O00370 AL096865.1-201ENST00000606796 927 ntBASIC16.7■□□□□ 0.26
O00370 AC004790.1-201ENST00000612686 536 ntBASIC16.7■□□□□ 0.26
O00370 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
O00370 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.7■□□□□ 0.26
O00370 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
O00370 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
O00370 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
O00370 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.7■□□□□ 0.26
O00370 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
O00370 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
O00370 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
O00370 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.69■□□□□ 0.26
O00370 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
O00370 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.69■□□□□ 0.26
O00370 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
O00370 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
O00370 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.69■□□□□ 0.26
O00370 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.69■□□□□ 0.26
O00370 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
O00370 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms