Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLIC1O00299 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLIC1O00299 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 YBX2P1-201ENST00000394192 760 ntBASIC14.81□□□□□ -0.04
CLIC1O00299 MCCD1P2-201ENST00000423228 335 ntBASIC14.81□□□□□ -0.04
CLIC1O00299 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 AL592309.1-201ENST00000443127 649 ntBASIC14.81□□□□□ -0.04
CLIC1O00299 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 RARRES2P9-201ENST00000565168 469 ntBASIC14.81□□□□□ -0.04
CLIC1O00299 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.81□□□□□ -0.04
CLIC1O00299 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.81□□□□□ -0.04
CLIC1O00299 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 ZBED1P1-201ENST00000502364 1930 ntBASIC14.81□□□□□ -0.04
CLIC1O00299 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 MROH4P-201ENST00000431302 1578 ntBASIC14.81□□□□□ -0.04
CLIC1O00299 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 FGD5P1-202ENST00000614866 2498 ntBASIC14.81□□□□□ -0.04
CLIC1O00299 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CLIC1O00299 AC007686.3-201ENST00000619017 3487 ntBASIC14.8□□□□□ -0.04
CLIC1O00299 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 AC026396.1-201ENST00000419388 421 ntBASIC14.8□□□□□ -0.04
CLIC1O00299 AC069335.1-201ENST00000489972 472 ntBASIC14.8□□□□□ -0.04
CLIC1O00299 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.8□□□□□ -0.04
CLIC1O00299 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.8□□□□□ -0.04
CLIC1O00299 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.8□□□□□ -0.04
CLIC1O00299 AC040169.1-201ENST00000565382 521 ntBASIC14.8□□□□□ -0.04
CLIC1O00299 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CLIC1O00299 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CLIC1O00299 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.8□□□□□ -0.04
CLIC1O00299 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.8□□□□□ -0.04
CLIC1O00299 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLIC1O00299 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLIC1O00299 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.79□□□□□ -0.04
CLIC1O00299 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLIC1O00299 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLIC1O00299 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CLIC1O00299 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLIC1O00299 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLIC1O00299 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLIC1O00299 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLIC1O00299 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms