Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RARRES2P5-201ENST00000564013 466 ntBASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 AC112504.1-201ENST00000623415 1841 ntBASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 PCDHA3-202ENST00000532566 4594 ntBASIC14.31□□□□□ -0.12
NPIPA2E9PIF3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 RN7SL837P-201ENST00000463010 287 ntBASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 IGHV3-71-201ENST00000523324 359 ntBASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 HILS1-202ENST00000545329 423 ntBASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 RRP7BP-205ENST00000566851 833 ntBASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 AL365203.3-201ENST00000609742 2057 ntBASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 PRAL-201ENST00000624952 3286 ntBASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA2E9PIF3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 ARSEP1-201ENST00000420443 635 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms