Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC134915.1-201ENST00000426461 574 ntBASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 GAPDHP40-201ENST00000505218 1006 ntBASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AC026410.3-201ENST00000514280 936 ntBASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AC005225.4-201ENST00000557330 545 ntBASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AC012645.4-201ENST00000610691 1061 ntBASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 AL358472.5-202ENST00000641448 1267 ntBASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
YJEFN3A6XGL0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 AC098614.1-201ENST00000368528 745 ntBASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 COX5BP8-201ENST00000416911 349 ntBASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 RPL13AP25-201ENST00000484130 612 ntBASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 AC120045.2-201ENST00000567334 178 ntBASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 AC124283.3-201ENST00000570869 594 ntBASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YJEFN3A6XGL0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms