Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC66A2RUB6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.33
CCDC66A2RUB6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 HAUS4P1-201ENST00000406739 1145 ntBASIC17.08■□□□□ 0.32
CCDC66A2RUB6 CRYGEP-201ENST00000412192 528 ntBASIC17.08■□□□□ 0.32
CCDC66A2RUB6 IGLL3P-201ENST00000412472 434 ntBASIC17.08■□□□□ 0.32
CCDC66A2RUB6 AC245100.5-201ENST00000452108 331 ntBASIC17.08■□□□□ 0.32
CCDC66A2RUB6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 MIR7706-201ENST00000613747 67 ntBASIC17.08■□□□□ 0.32
CCDC66A2RUB6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC66A2RUB6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CICP17-201ENST00000418553 2377 ntBASIC17.07■□□□□ 0.32
CCDC66A2RUB6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AC098831.1-202ENST00000438821 336 ntBASIC17.07■□□□□ 0.32
CCDC66A2RUB6 KRT18P34-201ENST00000488218 1270 ntBASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AC104692.2-201ENST00000603054 253 ntBASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AL009183.1-201ENST00000603760 355 ntBASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AL365330.1-201ENST00000607459 531 ntBASIC17.07■□□□□ 0.32
CCDC66A2RUB6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 COL6A4P2-202ENST00000504443 2753 ntBASIC17.07■□□□□ 0.32
CCDC66A2RUB6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms