Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC061975.2-201ENST00000581722 295 ntBASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AC004877.2-201ENST00000623941 599 ntBASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 SPTSSB-204ENST00000617024 1292 ntBASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AL161645.1-201ENST00000622716 1255 ntBASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AC015656.1-201ENST00000624209 3578 ntBASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 AL136982.4-201ENST00000437689 1740 ntBASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV5A0A0B4J249 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms