Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 SPDYE14P-201ENST00000442619 822 ntBASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 PHKG1P2-201ENST00000457537 863 ntBASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 LINC00554-201ENST00000564841 3011 ntBASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV1A0A0A0MS02 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AP006288.1-201ENST00000446065 395 ntBASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 MIR4453-201ENST00000584019 89 ntBASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV1A0A0A0MS02 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 AL035456.1-201ENST00000456064 1369 ntBASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.41□□□□□ -0.58
TRGV1A0A0A0MS02 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms