Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 ANKRD19P-201ENST00000338192 862 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 RPL13P2-201ENST00000440687 659 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 FAM8A2P-201ENST00000528813 1142 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 SLC25A47P1-201ENST00000531577 414 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AL022328.1-201ENST00000610050 478 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AL158212.4-201ENST00000624062 1286 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AL596087.1-201ENST00000400979 1969 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 KLF2P4-201ENST00000451959 1225 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 BNIP3P42-201ENST00000454982 569 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 ENPP7P5-201ENST00000541031 1031 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AC243562.2-201ENST00000561247 970 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 BNIP3P29-201ENST00000598302 571 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC01115-203ENST00000606068 577 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AC011447.5-201ENST00000616168 564 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 CU634019.7-201ENST00000624153 1185 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 FP236241.2-201ENST00000624906 1185 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms