Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MIR611-201ENST00000384869 67 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RN7SL838P-201ENST00000481676 295 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RN7SL322P-201ENST00000583519 299 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC124944.3-201ENST00000607976 1304 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 APRT-202ENST00000426324 664 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 DUX4L31-201ENST00000446466 1136 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AP003040.1-201ENST00000532044 1024 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AC013467.2-201ENST00000605472 835 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 ACY3-202ENST00000529256 933 ntTSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MIR2392-201ENST00000584881 84 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 PRR20FP-201ENST00000603320 180 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 Z82244.1-201ENST00000631502 840 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AC116353.5-201ENST00000638148 1699 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 GNG10P1-201ENST00000452289 199 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AC078814.4-201ENST00000546650 327 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MIR5193-201ENST00000584510 109 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 RNA5SP359-201ENST00000364838 113 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 GPAA1P2-202ENST00000606848 1787 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
MACF1Q9UPN3 METTL7AP1-201ENST00000547343 496 ntBASIC6.17□□□□□ -1.42
MACF1Q9UPN3 GOLGA2P10-201ENST00000550961 817 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms