Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AC015922.1-201ENST00000421102 1152 ntBASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AC135586.1-201ENST00000539323 574 ntBASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AC236430.1-201ENST00000402231 743 ntBASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 SPDYE18-201ENST00000510091 1050 ntBASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AC068587.6-202ENST00000641839 5619 ntBASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
KCMF1Q9P0J7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCMF1Q9P0J7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCMF1Q9P0J7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCMF1Q9P0J7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
KCMF1Q9P0J7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCMF1Q9P0J7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms