Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 AC079316.1-201ENST00000548397 411 ntBASIC18.71■□□□□ 0.59
SALL1Q9NSC2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 RHOXF1P1-202ENST00000635473 501 ntBASIC18.71■□□□□ 0.59
SALL1Q9NSC2 AL645728.2-202ENST00000641679 227 ntBASIC18.71■□□□□ 0.59
SALL1Q9NSC2 PRSS30P-206ENST00000641773 873 ntBASIC18.71■□□□□ 0.59
SALL1Q9NSC2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.71■□□□□ 0.59
SALL1Q9NSC2 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.71■□□□□ 0.59
SALL1Q9NSC2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 AL138709.1-201ENST00000614840 1693 ntBASIC18.7■□□□□ 0.58
SALL1Q9NSC2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.7■□□□□ 0.58
SALL1Q9NSC2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 KRT18P25-201ENST00000508931 1278 ntBASIC18.7■□□□□ 0.58
SALL1Q9NSC2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.7■□□□□ 0.58
SALL1Q9NSC2 AC084364.1-201ENST00000551967 1556 ntBASIC18.7■□□□□ 0.58
SALL1Q9NSC2 TUBB1P2-201ENST00000422712 1306 ntBASIC18.7■□□□□ 0.58
SALL1Q9NSC2 TUBB1P1-201ENST00000503144 1300 ntBASIC18.7■□□□□ 0.58
SALL1Q9NSC2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 AC126177.1-201ENST00000547829 2218 ntBASIC18.69■□□□□ 0.58
SALL1Q9NSC2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 REXO1L6P-201ENST00000603433 1515 ntBASIC18.69■□□□□ 0.58
SALL1Q9NSC2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 ACTBP8-201ENST00000403258 1108 ntBASIC18.69■□□□□ 0.58
SALL1Q9NSC2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 AC092658.1-201ENST00000505836 891 ntBASIC18.69■□□□□ 0.58
SALL1Q9NSC2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SALL1Q9NSC2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 PRAL-201ENST00000624952 3286 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms