Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ABCA3Q99758 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ABCA3Q99758 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.21■□□□□ 0.83
ABCA3Q99758 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ABCA3Q99758 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ABCA3Q99758 AL645933.1-201ENST00000440087 609 ntBASIC20.21■□□□□ 0.83
ABCA3Q99758 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCA3Q99758 AL031713.1-201ENST00000564813 661 ntBASIC20.21■□□□□ 0.83
ABCA3Q99758 MIR4522-201ENST00000584932 87 ntBASIC20.21■□□□□ 0.83
ABCA3Q99758 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ABCA3Q99758 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC20.21■□□□□ 0.83
ABCA3Q99758 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.21■□□□□ 0.83
ABCA3Q99758 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA3Q99758 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCA3Q99758 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ABCA3Q99758 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ABCA3Q99758 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCA3Q99758 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.2■□□□□ 0.82
ABCA3Q99758 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCA3Q99758 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
ABCA3Q99758 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.2■□□□□ 0.82
ABCA3Q99758 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCA3Q99758 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.2■□□□□ 0.82
ABCA3Q99758 IDS-203ENST00000428056 1213 ntTSL 2 BASIC20.2■□□□□ 0.82
ABCA3Q99758 RPL8P2-201ENST00000430538 502 ntBASIC20.2■□□□□ 0.82
ABCA3Q99758 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC20.2■□□□□ 0.82
ABCA3Q99758 AL157407.1-201ENST00000435784 904 ntBASIC20.2■□□□□ 0.82
ABCA3Q99758 AP000358.1-201ENST00000456260 156 ntBASIC20.2■□□□□ 0.82
ABCA3Q99758 PPOX-204ENST00000462866 473 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCA3Q99758 AC026434.2-201ENST00000506094 1078 ntBASIC20.2■□□□□ 0.82
ABCA3Q99758 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 FRMPD2B-201ENST00000431305 1347 ntBASIC20.2■□□□□ 0.82
ABCA3Q99758 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.2■□□□□ 0.82
ABCA3Q99758 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.2■□□□□ 0.82
ABCA3Q99758 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ABCA3Q99758 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ABCA3Q99758 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCA3Q99758 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 RNA5SP359-201ENST00000364838 113 ntBASIC20.19■□□□□ 0.82
ABCA3Q99758 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.19■□□□□ 0.82
ABCA3Q99758 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.19■□□□□ 0.82
ABCA3Q99758 PHBP15-201ENST00000574228 665 ntBASIC20.19■□□□□ 0.82
ABCA3Q99758 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.19■□□□□ 0.82
ABCA3Q99758 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCA3Q99758 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCA3Q99758 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 AC011676.5-201ENST00000624864 2660 ntBASIC20.19■□□□□ 0.82
ABCA3Q99758 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ABCA3Q99758 CYP4F23P-201ENST00000593402 1579 ntBASIC20.19■□□□□ 0.82
ABCA3Q99758 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 AC018629.1-201ENST00000623381 1736 ntBASIC20.19■□□□□ 0.82
ABCA3Q99758 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCA3Q99758 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.19■□□□□ 0.82
ABCA3Q99758 PUDPP3-201ENST00000445368 636 ntBASIC20.19■□□□□ 0.82
ABCA3Q99758 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.19■□□□□ 0.82
ABCA3Q99758 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ABCA3Q99758 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.19■□□□□ 0.82
ABCA3Q99758 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCA3Q99758 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCA3Q99758 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ABCA3Q99758 FAM90A2P-201ENST00000511144 1395 ntBASIC20.18■□□□□ 0.82
ABCA3Q99758 FAM90A25P-201ENST00000528404 1395 ntBASIC20.18■□□□□ 0.82
ABCA3Q99758 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCA3Q99758 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms