Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHOX2BQ99453 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.89■□□□□ 0.13
PHOX2BQ99453 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 COX5BP1-201ENST00000507622 393 ntBASIC15.89■□□□□ 0.13
PHOX2BQ99453 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 AC078819.1-201ENST00000547454 765 ntBASIC15.89■□□□□ 0.13
PHOX2BQ99453 AC012085.1-201ENST00000548270 765 ntBASIC15.89■□□□□ 0.13
PHOX2BQ99453 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 RN7SL574P-201ENST00000581512 297 ntBASIC15.89■□□□□ 0.13
PHOX2BQ99453 AC005252.2-201ENST00000624630 1141 ntBASIC15.89■□□□□ 0.13
PHOX2BQ99453 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 PCDHA14-201ENST00000506751 2298 ntBASIC15.89■□□□□ 0.13
PHOX2BQ99453 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.89■□□□□ 0.13
PHOX2BQ99453 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHOX2BQ99453 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 KRT8P49-201ENST00000604166 1432 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 FAM197Y7-201ENST00000432892 766 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC007688.1-201ENST00000475592 759 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC126915.1-201ENST00000522847 1038 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC135983.4-201ENST00000564116 1262 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 AL390728.6-201ENST00000566446 1246 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC073352.2-201ENST00000609385 439 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 AC092068.3-201ENST00000587894 2016 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 HYMAI-201ENST00000635591 3347 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.88■□□□□ 0.13
PHOX2BQ99453 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.88■□□□□ 0.13
PHOX2BQ99453 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHOX2BQ99453 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PHOX2BQ99453 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PHOX2BQ99453 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms