Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC007274.1-201ENST00000439805 662 ntBASIC14.86□□□□□ -0.03
TM9SF4Q92544 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AL162274.1-201ENST00000617191 1098 ntBASIC14.86□□□□□ -0.03
TM9SF4Q92544 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 REXO1L8P-201ENST00000604378 1897 ntBASIC14.86□□□□□ -0.03
TM9SF4Q92544 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 U82695.1-201ENST00000635752 1889 ntBASIC14.85□□□□□ -0.03
TM9SF4Q92544 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 U91328.1-201ENST00000437528 223 ntBASIC14.85□□□□□ -0.03
TM9SF4Q92544 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 LINC02447-202ENST00000501888 2146 ntBASIC14.85□□□□□ -0.03
TM9SF4Q92544 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 RRP7BP-205ENST00000566851 833 ntBASIC14.85□□□□□ -0.03
TM9SF4Q92544 AC106886.1-201ENST00000568660 600 ntBASIC14.85□□□□□ -0.03
TM9SF4Q92544 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 PPT1-215ENST00000641471 2368 ntBASIC14.85□□□□□ -0.03
TM9SF4Q92544 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF4Q92544 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF4Q92544 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 AP002414.2-201ENST00000591780 3365 ntBASIC14.84□□□□□ -0.03
TM9SF4Q92544 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms