Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 OR8S1-201ENST00000310194 1080 ntBASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 TMEM14DP-201ENST00000422205 345 ntBASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 AC007389.4-201ENST00000454674 793 ntBASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 RPL13AP25-201ENST00000484130 612 ntBASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 INTS4P2-202ENST00000614726 2019 ntBASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SCN4BQ8IWT1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 AC067930.6-201ENST00000623257 4947 ntBASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 AL162726.2-201ENST00000438986 1017 ntBASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 AC010319.3-201ENST00000597028 470 ntBASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 AC000095.1-201ENST00000603208 874 ntBASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCN4BQ8IWT1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 AL133267.1-201ENST00000398220 340 ntBASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 C1QBPP1-201ENST00000400117 770 ntBASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 AC120045.2-201ENST00000567334 178 ntBASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 AC015910.1-201ENST00000579400 975 ntBASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCN4BQ8IWT1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms