Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 RN7SKP214-201ENST00000364208 315 ntBASIC19.32■□□□□ 0.68
COL23A1Q86Y22 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.32■□□□□ 0.68
COL23A1Q86Y22 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 CTBP2P4-201ENST00000513884 920 ntBASIC19.32■□□□□ 0.68
COL23A1Q86Y22 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 SNORD3B-2-202ENST00000571722 791 ntBASIC19.32■□□□□ 0.68
COL23A1Q86Y22 MIR4683-201ENST00000579659 81 ntBASIC19.32■□□□□ 0.68
COL23A1Q86Y22 MIR4754-201ENST00000582477 89 ntBASIC19.32■□□□□ 0.68
COL23A1Q86Y22 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 AC106886.4-201ENST00000623557 2502 ntBASIC19.32■□□□□ 0.68
COL23A1Q86Y22 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL23A1Q86Y22 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.31■□□□□ 0.68
COL23A1Q86Y22 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 AC022616.1-201ENST00000518688 554 ntBASIC19.31■□□□□ 0.68
COL23A1Q86Y22 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL23A1Q86Y22 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 AC009955.4-201ENST00000597192 544 ntBASIC19.3■□□□□ 0.68
COL23A1Q86Y22 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 AC018695.7-201ENST00000624587 2492 ntBASIC19.3■□□□□ 0.68
COL23A1Q86Y22 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
COL23A1Q86Y22 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 TBC1D3J-201ENST00000620719 1426 ntBASIC19.29■□□□□ 0.68
COL23A1Q86Y22 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 RPL18P13-201ENST00000478088 569 ntBASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms