Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 BTNL10-201ENST00000595971 695 ntBASIC21.47■■□□□ 1.03
CDCA8Q53HL2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 BX539320.1-201ENST00000623759 877 ntBASIC21.47■■□□□ 1.03
CDCA8Q53HL2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDCA8Q53HL2 AC009090.5-201ENST00000624886 2285 ntBASIC21.46■■□□□ 1.03
CDCA8Q53HL2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 AC068587.3-201ENST00000526613 355 ntBASIC21.46■■□□□ 1.03
CDCA8Q53HL2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 AC233724.13-201ENST00000598383 410 ntBASIC21.46■■□□□ 1.03
CDCA8Q53HL2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 AP005019.2-201ENST00000615104 511 ntBASIC21.46■■□□□ 1.03
CDCA8Q53HL2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.46■■□□□ 1.03
CDCA8Q53HL2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.46■■□□□ 1.03
CDCA8Q53HL2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CDCA8Q53HL2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.45■■□□□ 1.02
CDCA8Q53HL2 BAATP1-201ENST00000412284 1225 ntBASIC21.45■■□□□ 1.02
CDCA8Q53HL2 TMEM14DP-201ENST00000422205 345 ntBASIC21.45■■□□□ 1.02
CDCA8Q53HL2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 AC093433.1-201ENST00000458048 571 ntBASIC21.45■■□□□ 1.02
CDCA8Q53HL2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 AC022137.2-201ENST00000503482 481 ntBASIC21.45■■□□□ 1.02
CDCA8Q53HL2 SLC25A47P1-201ENST00000531577 414 ntBASIC21.45■■□□□ 1.02
CDCA8Q53HL2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.45■■□□□ 1.02
CDCA8Q53HL2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDCA8Q53HL2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms