Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEP78395 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PRAMEP78395 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PRAMEP78395 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.88■□□□□ 0.13
PRAMEP78395 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.88■□□□□ 0.13
PRAMEP78395 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 AL512356.2-201ENST00000546955 174 ntBASIC15.88■□□□□ 0.13
PRAMEP78395 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.88■□□□□ 0.13
PRAMEP78395 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 AL691403.2-201ENST00000618460 490 ntBASIC15.88■□□□□ 0.13
PRAMEP78395 PPT1-215ENST00000641471 2368 ntBASIC15.88■□□□□ 0.13
PRAMEP78395 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.88■□□□□ 0.13
PRAMEP78395 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 AC090616.6-203ENST00000579186 1945 ntBASIC15.88■□□□□ 0.13
PRAMEP78395 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEP78395 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.87■□□□□ 0.13
PRAMEP78395 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.87■□□□□ 0.13
PRAMEP78395 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEP78395 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PRAMEP78395 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEP78395 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.87■□□□□ 0.13
PRAMEP78395 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PRAMEP78395 FO393414.2-201ENST00000405153 598 ntBASIC15.87■□□□□ 0.13
PRAMEP78395 TSEN15P1-201ENST00000423257 515 ntBASIC15.87■□□□□ 0.13
PRAMEP78395 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.87■□□□□ 0.13
PRAMEP78395 AC069262.1-201ENST00000539058 672 ntBASIC15.87■□□□□ 0.13
PRAMEP78395 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRAMEP78395 HNRNPUP1-201ENST00000554987 333 ntBASIC15.87■□□□□ 0.13
PRAMEP78395 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEP78395 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.87■□□□□ 0.13
PRAMEP78395 AL133215.2-201ENST00000609242 977 ntBASIC15.87■□□□□ 0.13
PRAMEP78395 AC023511.2-201ENST00000618803 211 ntBASIC15.87■□□□□ 0.13
PRAMEP78395 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEP78395 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEP78395 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.87■□□□□ 0.13
PRAMEP78395 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
PRAMEP78395 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRAMEP78395 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.87■□□□□ 0.13
PRAMEP78395 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEP78395 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PRAMEP78395 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 SPDYE17-201ENST00000412399 783 ntBASIC15.86■□□□□ 0.13
PRAMEP78395 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.86■□□□□ 0.13
PRAMEP78395 HLA-J-203ENST00000494367 1087 ntBASIC15.86■□□□□ 0.13
PRAMEP78395 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PRAMEP78395 AL589739.1-201ENST00000607720 493 ntBASIC15.86■□□□□ 0.13
PRAMEP78395 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms