Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN6P56747 AHCYP2-201ENST00000430630 1300 ntBASIC15.01□□□□□ -0.01
CLDN6P56747 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CLDN6P56747 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 AC005077.2-201ENST00000449786 690 ntBASIC15.01□□□□□ -0.01
CLDN6P56747 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN6P56747 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CLDN6P56747 AL450472.2-201ENST00000603663 1156 ntBASIC15.01□□□□□ -0.01
CLDN6P56747 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 AC145423.3-201ENST00000615987 467 ntBASIC15.01□□□□□ -0.01
CLDN6P56747 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN6P56747 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN6P56747 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN6P56747 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN6P56747 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15□□□□□ -0.01
CLDN6P56747 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15□□□□□ -0.01
CLDN6P56747 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 BTBD6P1-201ENST00000412176 1267 ntBASIC15□□□□□ -0.01
CLDN6P56747 AC245100.5-201ENST00000452108 331 ntBASIC15□□□□□ -0.01
CLDN6P56747 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15□□□□□ -0.01
CLDN6P56747 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 AC026410.3-201ENST00000514280 936 ntBASIC15□□□□□ -0.01
CLDN6P56747 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 RN7SL190P-201ENST00000582519 257 ntBASIC15□□□□□ -0.01
CLDN6P56747 AC016629.1-201ENST00000596579 586 ntBASIC15□□□□□ -0.01
CLDN6P56747 AC097359.3-201ENST00000603982 1210 ntBASIC15□□□□□ -0.01
CLDN6P56747 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15□□□□□ -0.01
CLDN6P56747 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 PCDHB19P-201ENST00000570871 2371 ntBASIC15□□□□□ -0.01
CLDN6P56747 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN6P56747 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15□□□□□ -0.01
CLDN6P56747 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CLDN6P56747 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN6P56747 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLDN6P56747 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN6P56747 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CLDN6P56747 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms