Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DRD5P1-201ENST00000456605 1438 ntBASIC15.96■□□□□ 0.15
CDH4P55283 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CDH4P55283 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.96■□□□□ 0.15
CDH4P55283 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH4P55283 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH4P55283 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH4P55283 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH4P55283 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH4P55283 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.96■□□□□ 0.15
CDH4P55283 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH4P55283 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH4P55283 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH4P55283 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.96■□□□□ 0.15
CDH4P55283 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 AC120045.2-201ENST00000567334 178 ntBASIC15.96■□□□□ 0.15
CDH4P55283 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH4P55283 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDH4P55283 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH4P55283 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 AC020658.6-201ENST00000623564 1870 ntBASIC15.96■□□□□ 0.15
CDH4P55283 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH4P55283 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH4P55283 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.96■□□□□ 0.15
CDH4P55283 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 AL139384.1-201ENST00000612143 3047 ntBASIC15.96■□□□□ 0.15
CDH4P55283 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH4P55283 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH4P55283 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 C1QBPP1-201ENST00000400117 770 ntBASIC15.95■□□□□ 0.14
CDH4P55283 SOCS2P1-201ENST00000417727 557 ntBASIC15.95■□□□□ 0.14
CDH4P55283 AL162726.2-201ENST00000438986 1017 ntBASIC15.95■□□□□ 0.14
CDH4P55283 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH4P55283 GAPDHP21-201ENST00000450301 1010 ntBASIC15.95■□□□□ 0.14
CDH4P55283 GAPDHP40-201ENST00000505218 1006 ntBASIC15.95■□□□□ 0.14
CDH4P55283 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH4P55283 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH4P55283 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH4P55283 AC124283.3-201ENST00000570869 594 ntBASIC15.95■□□□□ 0.14
CDH4P55283 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH4P55283 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH4P55283 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH4P55283 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH4P55283 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH4P55283 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH4P55283 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH4P55283 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms