Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF140P52738 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF140P52738 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF140P52738 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF140P52738 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF140P52738 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF140P52738 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
ZNF140P52738 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 CLK3P2-201ENST00000427566 1453 ntBASIC15.55■□□□□ 0.08
ZNF140P52738 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF140P52738 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF140P52738 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF140P52738 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.55■□□□□ 0.08
ZNF140P52738 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.55■□□□□ 0.08
ZNF140P52738 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF140P52738 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZNF140P52738 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
ZNF140P52738 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF140P52738 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 CICP11-201ENST00000434745 2827 ntBASIC15.54■□□□□ 0.08
ZNF140P52738 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 MST1L-201ENST00000442552 2185 ntBASIC15.54■□□□□ 0.08
ZNF140P52738 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ZNF140P52738 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF140P52738 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.54■□□□□ 0.08
ZNF140P52738 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.54■□□□□ 0.08
ZNF140P52738 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF140P52738 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 AJ011932.1-201ENST00000621707 465 ntBASIC15.54■□□□□ 0.08
ZNF140P52738 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.54■□□□□ 0.08
ZNF140P52738 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF140P52738 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ZNF140P52738 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 AC091951.1-201ENST00000512854 2465 ntBASIC15.54■□□□□ 0.08
ZNF140P52738 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ZNF140P52738 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF140P52738 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF140P52738 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF140P52738 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ZNF140P52738 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms