Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.64■□□□□ 0.41
USP11P51784 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 INTS4P2-202ENST00000614726 2019 ntBASIC17.64■□□□□ 0.41
USP11P51784 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP11P51784 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP11P51784 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP11P51784 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.63■□□□□ 0.41
USP11P51784 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.63■□□□□ 0.41
USP11P51784 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.63■□□□□ 0.41
USP11P51784 RN7SL692P-201ENST00000464677 288 ntBASIC17.63■□□□□ 0.41
USP11P51784 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.63■□□□□ 0.41
USP11P51784 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 AC133539.2-201ENST00000604757 467 ntBASIC17.63■□□□□ 0.41
USP11P51784 AC093813.1-201ENST00000605066 256 ntBASIC17.63■□□□□ 0.41
USP11P51784 WFDC1-204ENST00000613603 549 ntBASIC17.63■□□□□ 0.41
USP11P51784 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.63■□□□□ 0.41
USP11P51784 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.63■□□□□ 0.41
USP11P51784 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP11P51784 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.63■□□□□ 0.41
USP11P51784 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 AP006294.1-201ENST00000415407 339 ntBASIC17.62■□□□□ 0.41
USP11P51784 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.62■□□□□ 0.41
USP11P51784 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.62■□□□□ 0.41
USP11P51784 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.62■□□□□ 0.41
USP11P51784 ENPP7P5-201ENST00000541031 1031 ntBASIC17.62■□□□□ 0.41
USP11P51784 AL359711.2-201ENST00000563105 872 ntBASIC17.62■□□□□ 0.41
USP11P51784 AC120045.2-201ENST00000567334 178 ntBASIC17.62■□□□□ 0.41
USP11P51784 AC124283.3-201ENST00000570869 594 ntBASIC17.62■□□□□ 0.41
USP11P51784 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.62■□□□□ 0.41
USP11P51784 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP11P51784 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.62■□□□□ 0.41
USP11P51784 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms