Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC1A1P43005 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC1A1P43005 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 RPSAP43-201ENST00000402237 625 ntBASIC16.42■□□□□ 0.22
SLC1A1P43005 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC1A1P43005 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC1A1P43005 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC1A1P43005 MTND6P24-201ENST00000440466 518 ntBASIC16.42■□□□□ 0.22
SLC1A1P43005 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC1A1P43005 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC1A1P43005 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.42■□□□□ 0.22
SLC1A1P43005 MIR4453-201ENST00000584019 89 ntBASIC16.42■□□□□ 0.22
SLC1A1P43005 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 MIR6069-201ENST00000620069 79 ntBASIC16.42■□□□□ 0.22
SLC1A1P43005 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC1A1P43005 ZBED1P1-201ENST00000502364 1930 ntBASIC16.42■□□□□ 0.22
SLC1A1P43005 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC1A1P43005 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SLC1A1P43005 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SLC1A1P43005 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SLC1A1P43005 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC1A1P43005 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC1A1P43005 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A1P43005 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A1P43005 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SLC1A1P43005 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AL512356.2-201ENST00000546955 174 ntBASIC16.41■□□□□ 0.22
SLC1A1P43005 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLC1A1P43005 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLC1A1P43005 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A1P43005 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 FLJ16779-201ENST00000612722 7638 ntBASIC16.41■□□□□ 0.22
SLC1A1P43005 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A1P43005 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A1P43005 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A1P43005 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A1P43005 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.4■□□□□ 0.22
SLC1A1P43005 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A1P43005 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC1A1P43005 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC1A1P43005 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A1P43005 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A1P43005 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A1P43005 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A1P43005 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms