Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
COL11A1P12107 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.44■□□□□ 0.38
COL11A1P12107 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.44■□□□□ 0.38
COL11A1P12107 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.44■□□□□ 0.38
COL11A1P12107 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.44■□□□□ 0.38
COL11A1P12107 AC138466.3-201ENST00000619983 221 ntBASIC17.44■□□□□ 0.38
COL11A1P12107 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.44■□□□□ 0.38
COL11A1P12107 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
COL11A1P12107 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COL11A1P12107 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.44■□□□□ 0.38
COL11A1P12107 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.44■□□□□ 0.38
COL11A1P12107 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COL11A1P12107 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.44■□□□□ 0.38
COL11A1P12107 FTLP10-202ENST00000505798 471 ntBASIC17.44■□□□□ 0.38
COL11A1P12107 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.44■□□□□ 0.38
COL11A1P12107 AL358472.3-201ENST00000608147 415 ntBASIC17.44■□□□□ 0.38
COL11A1P12107 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.44■□□□□ 0.38
COL11A1P12107 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL11A1P12107 AC092850.2-201ENST00000623821 2697 ntBASIC17.44■□□□□ 0.38
COL11A1P12107 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.43■□□□□ 0.38
COL11A1P12107 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.43■□□□□ 0.38
COL11A1P12107 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.43■□□□□ 0.38
COL11A1P12107 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.43■□□□□ 0.38
COL11A1P12107 AP003680.1-201ENST00000598970 3660 ntBASIC17.43■□□□□ 0.38
COL11A1P12107 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL11A1P12107 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
COL11A1P12107 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.43■□□□□ 0.38
COL11A1P12107 CD8B2-202ENST00000417670 633 ntBASIC17.43■□□□□ 0.38
COL11A1P12107 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.43■□□□□ 0.38
COL11A1P12107 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
COL11A1P12107 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.43■□□□□ 0.38
COL11A1P12107 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.43■□□□□ 0.38
COL11A1P12107 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COL11A1P12107 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.43■□□□□ 0.38
COL11A1P12107 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL11A1P12107 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.42■□□□□ 0.38
COL11A1P12107 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.42■□□□□ 0.38
COL11A1P12107 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 AKR7A2P1-201ENST00000460134 915 ntBASIC17.42■□□□□ 0.38
COL11A1P12107 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.42■□□□□ 0.38
COL11A1P12107 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.42■□□□□ 0.38
COL11A1P12107 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 AC020914.3-201ENST00000594712 304 ntBASIC17.42■□□□□ 0.38
COL11A1P12107 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
COL11A1P12107 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 AC099398.1-201ENST00000567919 2776 ntBASIC17.42■□□□□ 0.38
COL11A1P12107 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.42■□□□□ 0.38
COL11A1P12107 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms