Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 AC005052.1-201ENST00000625181 2492 ntBASIC16.43■□□□□ 0.22
RB1P06400 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RB1P06400 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.43■□□□□ 0.22
RB1P06400 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RB1P06400 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.43■□□□□ 0.22
RB1P06400 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RB1P06400 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 AC006449.6-201ENST00000612330 2296 ntBASIC16.42■□□□□ 0.22
RB1P06400 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.42■□□□□ 0.22
RB1P06400 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.42■□□□□ 0.22
RB1P06400 NKAIN1P1-201ENST00000435754 582 ntBASIC16.42■□□□□ 0.22
RB1P06400 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.42■□□□□ 0.22
RB1P06400 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 IMP3P2-201ENST00000489760 475 ntBASIC16.42■□□□□ 0.22
RB1P06400 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.42■□□□□ 0.22
RB1P06400 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.42■□□□□ 0.22
RB1P06400 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.42■□□□□ 0.22
RB1P06400 AC025181.2-201ENST00000606994 802 ntBASIC16.42■□□□□ 0.22
RB1P06400 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.42■□□□□ 0.22
RB1P06400 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.42■□□□□ 0.22
RB1P06400 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RB1P06400 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.42■□□□□ 0.22
RB1P06400 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RB1P06400 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.42■□□□□ 0.22
RB1P06400 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RB1P06400 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RB1P06400 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RB1P06400 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RB1P06400 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.41■□□□□ 0.22
RB1P06400 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.41■□□□□ 0.22
RB1P06400 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.41■□□□□ 0.22
RB1P06400 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.41■□□□□ 0.22
RB1P06400 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.41■□□□□ 0.22
RB1P06400 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.41■□□□□ 0.22
RB1P06400 AC044849.1-201ENST00000519737 1188 ntBASIC16.41■□□□□ 0.22
RB1P06400 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
RB1P06400 RN7SL713P-201ENST00000582127 302 ntBASIC16.41■□□□□ 0.22
RB1P06400 MIR4706-201ENST00000582134 82 ntBASIC16.41■□□□□ 0.22
RB1P06400 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
RB1P06400 ZACNP1-201ENST00000612259 710 ntBASIC16.41■□□□□ 0.22
RB1P06400 AP001505.2-201ENST00000616815 443 ntBASIC16.41■□□□□ 0.22
RB1P06400 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.41■□□□□ 0.22
RB1P06400 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.41■□□□□ 0.22
RB1P06400 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RB1P06400 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.41■□□□□ 0.22
RB1P06400 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RB1P06400 TUBBP5-203ENST00000508529 1334 ntBASIC16.41■□□□□ 0.22
RB1P06400 ALOX12P2-203ENST00000570921 1945 ntBASIC16.41■□□□□ 0.22
RB1P06400 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RB1P06400 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RB1P06400 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.41■□□□□ 0.22
RB1P06400 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.4■□□□□ 0.22
RB1P06400 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
RB1P06400 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.4■□□□□ 0.22
RB1P06400 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
RB1P06400 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.4■□□□□ 0.22
RB1P06400 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RB1P06400 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms