Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFBP01127 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFBP01127 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFBP01127 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFBP01127 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PDGFBP01127 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.54■□□□□ 0.08
PDGFBP01127 AC073150.1-201ENST00000450406 1084 ntBASIC15.54■□□□□ 0.08
PDGFBP01127 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PDGFBP01127 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.54■□□□□ 0.08
PDGFBP01127 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.54■□□□□ 0.08
PDGFBP01127 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.54■□□□□ 0.08
PDGFBP01127 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFBP01127 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDGFBP01127 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PDGFBP01127 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PDGFBP01127 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 AL139094.1-201ENST00000405549 1188 ntBASIC15.53■□□□□ 0.08
PDGFBP01127 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.53■□□□□ 0.08
PDGFBP01127 GHSR-202ENST00000427970 912 ntBASIC15.53■□□□□ 0.08
PDGFBP01127 EIF3FP3-201ENST00000434851 1086 ntBASIC15.53■□□□□ 0.08
PDGFBP01127 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.53■□□□□ 0.08
PDGFBP01127 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDGFBP01127 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 AC106820.3-201ENST00000561653 397 ntBASIC15.53■□□□□ 0.08
PDGFBP01127 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.53■□□□□ 0.08
PDGFBP01127 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PDGFBP01127 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
PDGFBP01127 AC007718.1-201ENST00000621078 280 ntBASIC15.53■□□□□ 0.08
PDGFBP01127 AC127024.7-201ENST00000625101 200 ntBASIC15.53■□□□□ 0.08
PDGFBP01127 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFBP01127 AC078925.2-201ENST00000624013 1973 ntBASIC15.53■□□□□ 0.08
PDGFBP01127 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.53■□□□□ 0.08
PDGFBP01127 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.53■□□□□ 0.08
PDGFBP01127 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFBP01127 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDGFBP01127 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms